hv_anndata

A	Accessor for anndata.
AnnDataInterface(*, name)	Anndata interface for holoviews.
Dims	Holoviews Dimensions.
register()	Register the data type and interface with holoviews.
GeneSelector(**params)	A custom Panel widget for managing and selecting marker genes.
ClusterMap([adata])	Interactive cluster map application for exploring AnnData objects.
ClusterMapConfig	Configuration options for cluster map plotting.
create_clustermap_plot(adata, *[, use_raw, ...])	Create a hierarchically-clustered heatmap using HoloViews.
Dotmap(**params)	Create a DotmapPlot from anndata.
DotmapParams(*, expression_cutoff, kdims, ...)	Shared parameters.
ManifoldMap(**params)	Interactive manifold map application for exploring AnnData objects.
ManifoldMapConfig	Configuration options for manifold map plotting.
create_manifoldmap_plot(adata, dr_key[, ...])	Create a comprehensive manifold map plot with options for datashading and labels.

Submodules

plotting.scanpy	Scanpy plots.
plotting.utils	Statistical utilities used in plotting.