---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/core/dimension.py:1381, in Dimensioned._repr_mimebundle_(self, include, exclude)
1374 def _repr_mimebundle_(self, include=None, exclude=None):
1375 """Resolves the class hierarchy for the class rendering the
1376 object using any display hooks registered on Store.display
1377 hooks. The output of all registered display_hooks is then
1378 combined and returned.
1379
1380 """
-> 1381 return Store.render(self)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/core/options.py:1433, in Store.render(cls, obj)
1431 data, metadata = {}, {}
1432 for hook in hooks:
-> 1433 ret = hook(obj)
1434 if ret is None:
1435 continue
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/ipython/display_hooks.py:340, in pprint_display(obj)
338 if not ip.display_formatter.formatters['text/plain'].pprint:
339 return None
--> 340 return display(obj, raw_output=True)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/ipython/display_hooks.py:311, in display(obj, raw_output, **kwargs)
309 elif isinstance(obj, (Layout, NdLayout, AdjointLayout)):
310 with option_state(obj):
--> 311 output = layout_display(obj)
312 elif isinstance(obj, (HoloMap, DynamicMap)):
313 with option_state(obj):
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/ipython/display_hooks.py:205, in display_hook.<locals>.wrapped(element)
203 try:
204 max_frames = OutputSettings.options['max_frames']
--> 205 mimebundle = fn(element, max_frames=max_frames)
206 if mimebundle is None:
207 return {}, {}
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/ipython/display_hooks.py:274, in layout_display(layout, max_frames)
271 max_frame_warning(max_frames)
272 return None
--> 274 return render(layout)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/ipython/display_hooks.py:76, in render(obj, **kwargs)
73 if renderer.fig == 'pdf':
74 renderer = renderer.instance(fig='png')
---> 76 return renderer.components(obj, **kwargs)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/renderer.py:396, in Renderer.components(self, obj, fmt, comm, **kwargs)
394 embed = (not (dynamic or streams or self.widget_mode == 'live') or config.embed)
395 if embed or config.comms == 'default':
--> 396 return self._render_panel(plot, embed, comm)
397 return self._render_ipywidget(plot)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/renderer.py:403, in Renderer._render_panel(self, plot, embed, comm)
401 doc = Document()
402 with config.set(embed=embed):
--> 403 model = plot.layout._render_model(doc, comm)
404 if embed:
405 return render_model(model, comm)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/viewable.py:775, in Viewable._render_model(self, doc, comm)
773 if comm is None:
774 comm = state._comm_manager.get_server_comm()
--> 775 model = self.get_root(doc, comm)
777 if self._design and self._design.theme.bokeh_theme:
778 doc.theme = self._design.theme.bokeh_theme
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/layout/base.py:332, in Panel.get_root(self, doc, comm, preprocess)
328 def get_root(
329 self, doc: Document | None = None, comm: Comm | None = None,
330 preprocess: bool = True
331 ) -> Model:
--> 332 root = super().get_root(doc, comm, preprocess)
333 # ALERT: Find a better way to handle this
334 if hasattr(root, 'styles') and 'overflow-x' in root.styles:
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/viewable.py:705, in Renderable.get_root(self, doc, comm, preprocess)
703 wrapper = self._design._wrapper(self)
704 if wrapper is self:
--> 705 root = self._get_model(doc, comm=comm)
706 if preprocess:
707 self._preprocess(root)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/layout/base.py:316, in Panel._get_model(self, doc, root, parent, comm)
314 root = root or model
315 self._models[root.ref['id']] = (model, parent)
--> 316 objects, _ = self._get_objects(model, [], doc, root, comm)
317 props = self._get_properties(doc)
318 props[self._property_mapping['objects']] = objects
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/layout/base.py:298, in Panel._get_objects(self, model, old_objects, doc, root, comm)
296 else:
297 try:
--> 298 child = pane._get_model(doc, root, model, comm)
299 except RerenderError as e:
300 if e.layout is not None and e.layout is not self:
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/pane/holoviews.py:494, in HoloViews._get_model(self, doc, root, parent, comm)
492 plot = self.object
493 else:
--> 494 plot = self._render(doc, comm, root)
496 plot.pane = self
497 backend = plot.renderer.backend
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/panel/pane/holoviews.py:588, in HoloViews._render(self, doc, comm, root)
585 if comm:
586 kwargs['comm'] = comm
--> 588 return renderer.get_plot(self.object, **kwargs)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/renderer.py:70, in BokehRenderer.get_plot(self_or_cls, obj, doc, renderer, **kwargs)
63 @bothmethod
64 def get_plot(self_or_cls, obj, doc=None, renderer=None, **kwargs):
65 """Given a HoloViews Viewable return a corresponding plot instance.
66 Allows supplying a document attach the plot to, useful when
67 combining the bokeh model with another plot.
68
69 """
---> 70 plot = super().get_plot(obj, doc, renderer, **kwargs)
71 if plot.document is None:
72 plot.document = Document() if self_or_cls.notebook_context else curdoc()
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/renderer.py:239, in Renderer.get_plot(self_or_cls, obj, doc, renderer, comm, **kwargs)
236 defaults = [kd.default for kd in plot.dimensions]
237 init_key = tuple(v if d is None else d for v, d in
238 zip(plot.keys[0], defaults, strict=None))
--> 239 plot.update(init_key)
240 else:
241 plot = obj
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/plot.py:958, in DimensionedPlot.update(self, key)
956 def update(self, key):
957 if len(self) == 1 and key in (0, self.keys[0]) and not self.drawn:
--> 958 return self.initialize_plot()
959 item = self.__getitem__(key)
960 self.traverse(lambda x: setattr(x, '_updated', True))
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/plot.py:954, in LayoutPlot.initialize_plot(self, plots, ranges)
951 continue
953 shared_plots = list(passed_plots) if self.shared_axes else None
--> 954 subplots = subplot.initialize_plot(ranges=ranges, plots=shared_plots)
955 nsubplots = len(subplots)
957 modes = {sp.sizing_mode for sp in subplots
958 if sp.sizing_mode not in (None, 'auto', 'fixed')}
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/plot.py:1103, in AdjointLayoutPlot.initialize_plot(self, ranges, plots)
1101 else:
1102 passed_plots = plots + adjoined_plots
-> 1103 adjoined_plots.append(subplot.initialize_plot(ranges=ranges, plots=passed_plots))
1104 self.drawn = True
1105 return adjoined_plots or [None]
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/element.py:2220, in ElementPlot.initialize_plot(self, ranges, plot, plots, source)
2218 if self.autorange:
2219 self._setup_autorange()
-> 2220 self._init_glyphs(plot, element, ranges, source)
2221 if not self.overlaid:
2222 self._update_plot(key, plot, style_element)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/element.py:2548, in CompositeElementPlot._init_glyphs(self, plot, element, ranges, source, data, mapping, style)
2546 if None in (data, mapping):
2547 style = self.style[self.cyclic_index]
-> 2548 data, mapping, style = self.get_data(element, ranges, style)
2550 keys = glyph_order(dict(data, **mapping), self._draw_order)
2552 source_cache = {}
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/stats.py:551, in ViolinPlot.get_data(self, element, ranges, style)
549 if element.kdims:
550 key = tuple(d.pprint_value(k) for d, k in zip(element.kdims, key, strict=None))
--> 551 kde, line, segs, bars, scatter = self._kde_data(
552 element, g, key, split_dim, split_cats, **kwargs
553 )
554 for k, v in segs.items():
555 seg_data[k] += v
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/stats.py:488, in ViolinPlot._kde_data(self, element, el, key, split_dim, split_cats, **kwargs)
486 elif self.inner == 'box':
487 xpos = (*key, 0)
--> 488 q1, q2, q3, upper, lower, _ = self._box_stats(values)
489 segments['x'].append(xpos)
490 segments['y0'].append(lower)
File ~/.local/share/hatch/env/virtual/hv-anndata/STk7F69l/docs/lib/python3.13/site-packages/holoviews/plotting/bokeh/stats.py:164, in BoxWhiskerPlot._box_stats(self, vals)
162 q1, q2, q3 = 0, 0, 0
163 upper, lower = 0, 0
--> 164 outliers = vals[(vals > upper) | (vals < lower)]
166 if is_cupy:
167 return (q1.item(), q2.item(), q3.item(), upper.item(),
168 lower.item(), cupy.asnumpy(outliers))
TypeError: unsupported operand type(s) for |: 'NumpyExtensionArray' and 'NumpyExtensionArray'
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